
Cane Farmers: Going the Distance
150 cane farmers are participating in a project to boost productivity and water quality
Healthy waterways underpin our lifestyles and livelihoods. When waterways thrive, so do we.
In an Australia-first, barramundi producer Marty Phillips is looking beyond wetlands to bioreactors to improve the quality of water leaving his farms.
For 20 years Marty Phillips has relied on a series of natural wetlands to remove nitrogen from the water leaving his barramundi farms in the Innisfail district. Now he is also turning his attention to bioreactors, with the help of university researchers.
Put simply, these bioreactors are woodchip-filled containers. They can remove excess nitrogen in surface water and groundwater by creating the right conditions – a low-oxygen environment and carbon – for microbes to convert nitrate into harmless nitrogen gas.
After a series of trials on cane farms across the Wet Tropics in recent years, the innovative water treatment systems have now been trialled in the aquaculture industry.
James Cook University’s Alexander Cheesman says fish farms have ideal conditions for trialling woodchip bioreactors because of their more stable flows of water and their production of nitrate (a result of the fish eating protein-rich food).
His team installed a series of 10m-long, 1.8m-wide and 1.5m-deep bioreactor beds between aquaculture ponds and treatment wetlands on one of Marty’s farms and regularly collected water samples at different points.
“Bioreactors ramp up the microbial process that naturally occur in wetlands. Our trials showed they are an effective water quality treatment system in aquaculture. So now the challenge is applying them cost effectively at a large-scale commercial level.”
Mainstream Aquaculture Queensland has the capacity to produce five thousand tonnes of fish each year. Marty says as his business expands his challenge is managing water sustainably.
“We’ve always treated our waste water through a series of natural wetlands and we’ve also investigated growing algae in the water as another way to remove nutrients, which works but it would be difficult to scale that up to the level we need. Woodchips offer a more compact footprint. We are now looking at a combination of all three.
“We all have a responsibility to do the right thing by the environment. We take water from the creek – we have a greater vested interest than many others to keep our waterways healthy.”
The bioreactor trials were funded by the Australian Government and Mainstream Aquaculture.

150 cane farmers are participating in a project to boost productivity and water quality

Read about some of our region's rare and unusual native fish species

Banana farmers making land management changes to improve water quality to the Reef

Martine joined the Wet Tropics Waterways team as a Science Technical Officer in early 2024. She is an environmental scientist and ecologist and has worked on water quality and aquatic ecology projects as a consultant and in private industry for over 20 years. She is using her experience in statistical programming and database development to develop new systems for the Report Card.

Richard has been the Science Technical Officer for Wet Tropics Waterways since 2016. His role involves producing the annual results for the waterway health assessment of the wet tropics region using data from a wide range of sources, to present as scores and grades, as well as developing new indicators to address knowledge and monitoring gaps. He works in collaboration with technical staff at other regional report cards.
Richard has a background in freshwater ecology research projects and environmental assessments with CSIRO, University of Queensland, Queensland Government and as a consultant. For a long time he’s been interested in freshwater aquaculture and continues this interest through farming freshwater crayfish, alongside other farming activities.

Simon has over 30 years’ experience advocating for waterways across academia, government and the private sector. He started out in marine botany with a fascination for seagrass, mangroves and macroalgae, and has gone on to lead major environmental initiatives both in Australia and overseas. He has established report cards in eight countries.

Rowan is a conservation scientist with a background in wildlife science and tropical ecology. She holds a Bachelor of Wildlife Science from the University of Queensland and has recently completed a Master of Tropical Biology and Conservation at James Cook University.
Rowan brings experience in science communication, with a strong interest in connecting people with conservation outcomes. In her role with Wet Tropics Waterways, she supports initiatives that combine scientific knowledge with community outreach to help protect the Wet Tropics and Great Barrier Reef catchments, and to strengthen collaboration between researchers, stakeholders, and the wider community.